YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15238304, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVTGLAAR TISSSVAINS RLTQSMAITT ISSSEPISRR FGGLPEIKTP SFAGGVAGVV  60
   61 FFSAAAVSSL GQEVHAKEMA QKFNPKEVVL YQYEACPFCN KVKAFLDYNK IPYKVVEVNP 120
  121 ISKKEIKWSD YKKVPILTVD GEQMVDSSVI IDSLFQKMHP EISKSEDDEE TKWRKWVDNH 180
  181 LVHLLSPNIY RNTSEALESF EYITTHGNFS FTERLVAKYA GATAMYFVSK KLKKKYNITD 240
  241 ERAALYDAAE TWVDALKERP YLGGSKPNLG DLAVFGVLRP IRYLRSGKDM VDNTRIGEWY 300
  301 SRMENTVGEP SRIKE

Type	Start	End	Confidence
Signal Peptide	1	17	0.45
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	315	0.84