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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK2_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKEPVHILP LYLPCLLMFL LSSLRQITGD ARARAVKVTC SPLLEHNETA YVPNFVATME  60
   61 KISTQVQTSG FGVALTGTGP DANYGLAQCY GDLPLNDCVL CYAEARTMLP QCYPQNGGRI 120
  121 FLDGCFMRAE NYSFYNEYKG PEDSIVCGNT TRKNKTFGDA VRQGLRNAVT EASGTGGYAR 180
  181 ASAKAGESES ESAFVLANCW RTLSPDSCKQ CLENASASVV KGCLPWSEGR ALHTGCFLRY 240
  241 SDQDFLNKIP RNGRSRGSVV VIVVSVLSSV VVFMIGVAVS VYICKRRTIK RKRRGSKDVE 300
  301 KMAKTLKDSS LNFKYSTLEK ATGSFDNANK LGQGGFGTVY KGVLPDGRDI AVKRLFFNNR 360
  361 HRATDFYNEV NMISTVEHKN LVRLLGCSCS GPESLLVYEY LQNKSLDRFI FDVNRGKTLD 420
  421 WQRRYTIIVG TAEGLVYLHE QSSVKIIHRD IKASNILLDS KLQAKIADFG LARSFQDDKS 480
  481 HISTAIAGTL GYMAPEYLAH GQLTEMVDVY SFGVLVLEIV TGKQNTKSKM SDYSDSLITE 540
  541 AWKHFQSGEL EKIYDPNLDW KSQYDSHIIK KEIARVVQIG LLCTQEIPSL RPPMSKLLHM 600
  601 LKNKEEVLPL PSNPPFMDER VMELRDGSDG DSAGCASLAT VSQSSFYGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle