YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADSL2_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETTKDDGS SQKKSVRKEK RAYVLRKWTQ FDVGRASTVG TVHLLCLLAP FNYKWEAFRF  60
   61 GIILAILTNL CITFSYHRNL THRSFKLPKW LEYPFAYSAL LALQGDPLDW VSIHRFHHQF 120
  121 TDSDRDPHSP IEGFWFSHVL WIFDTDYIRE KCGRRNNVMD LKQQWFYRFL KKTLVLHILA 180
  181 FWTLIYLWGG LPYLTWTVGF GGVIGYHGTW LVNSACHICG SQAWQTNDTS RNVWWLALLT 240
  241 MGESWHNNHH AFETSARHGL EWYQLDITWY LIWFFQALGL ATNVKLPTDA QKRKMAIRR

Type	Start	End	Confidence
Cytoplasmic	1	30	0.90
Transmembrane Helix	31	51	0.84
Non-Cytoplasmic	52	56	0.83
Transmembrane Helix	57	77	0.90
Cytoplasmic	78	172	0.94
Transmembrane Helix	173	196	0.83
Non-Cytoplasmic	197	266	0.64
Transmembrane Helix	267	287	0.89
Cytoplasmic	288	299	0.95