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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5668770
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPAAATAR AQALSLLAAA NNHGDLAVKL SSLRQVKEIL LSLEPSLSAE IFPYLAELHL  60
   61 SREILVRKSL IEIIEEVGLR MLDHSYVLVS VLLVLSRDED PTVAKKSISV GTTFFCTILE 120
  121 EMAMQFHHRG KVDRWCGELW TWMVKFKDTV FATALEPGCV GVKVLALKFM ETFILLFTPD 180
  181 ASDPEKASSE GSRHMFNISW LAGGHPILNP ATLMSEANRT FGILVDFIQS ANRLPGALTI 240
  241 SVISWYVSES IPLCLCRIMS KVSHRNGCVI NSLSFSLAVV ARKRPVHYNT VLSVLLEFHP 300
  301 NLETVKGCHA ASVQYSIRTA FLGFLRCTFS PIIESRDKLL RAFRAMNAAD VADQVLRQVD 360
  361 KLVRNNERAA RENWSGKNNQ VISHQNSWDL SKKRIMPQGE DDTINGEVAP KRVRHNTNMH 420
  421 LTQQVQTNES LQGPVSINGI SSGNHLSDSE LTPVEQMVSM IGALLAEGDR GAASLEILIS 480
  481 KLHPDMLADI VITSMKHLPS TPPTLASSVA TPADIVVSSS TNTVHSPTPP AQLPFDPILP 540
  541 AGSSFSEVPS LSSSVADPRR DPRRDPRRMD PRRLNSSVGP TSLPVGEGKE SVPVQKDIST 600
  601 LLSKPVSVSA VTPGATGSVH STAVELSQNK MMGSSGIRII DPPECREDLL TVPNECSYPS 660
  661 KEISSLDVPL SPCRDDEGIR ETKYSVPDLD MLSVPDFDQH SPSASVPDFD QDPPAASDIT 720
  721 APEESYRELD PVPSYVELTT EQSKTVGKLA IERIIESNRH VFGFDCNKIR MALIARLIAR 780
  781 IDAGSDVATI LRELISVDHR EFKGHDLVLH VLYHLHSMAI LDTDESSFYA TVYENFLISV 840
  841 ARSFLDALPA SDKSFSRLFG EAPHLPDSAI NLLDELCSTR HDPVGKEVCD SERVTQGLGA 900
  901 VWSLILVRPN ERKACLAIAL KCSVHSEEEV RAKAIRLVRK LVPYSTMVTN KLYHLTYIAE 960
  961 HVEQFATDML LTAVNSETNL SQTASTAEGI KMEAKSQITL TTESLGSGNS DIPSQQDLQT1020
 1021 SREVSVISIS EAQRLISLFF ALCKKKPSLL RLVFEVYGRA PKMVNQDVSI LIPLLSSLTK1080
 1081 DEVLPIFPPL LNLPPEKFQL ALAHILQGSA HTGPALTPAE VLIAIHDIVP EKDGPPLKKI1140
 1141 TDACSACFEQ RTVFTQQVLA KALGQMVDRT PLPLLFMRTV IQAIDAFPTL VDFVMEILSK1200
 1201 LVRKQIWRLP KLWPGFLKCV SQTKPHSFPV LLELPVPQLE SIMKKFPDLR PSLTAYANQP1260
 1261 TIRSSLPNSA LSVLGLDNGQ DSRSQMHPSD ATSSIHGAAL T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle