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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11994430
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQREINQME KFFFISVFLL PYVITTFAFP PSTDSRWIVD DGNKGRRVKL TCVNWPSHLE  60
   61 TAVAEGLSKQ PLDAIAEKIV SMGFNCVRLT WPLYLATDES FSAFMTVRQS LRKFRLFEAV 120
  121 SGFQTHNPTI LDLPLIKAFQ EVVYCLEKHR VMVILDNHIS QPGWCCSDND GNGFFGDKHL 180
  181 NPQVWIKGLK KMASMFANVS SNVVGMSLRN ELRGPKQNIK DWYKYMREGA EAVHSVNPNV 240
  241 LVIVSGLNYA TDLSFLRERP FEVSFRRKVV FEIHWYGFWN TWEGDNLNKI CGKETEKMMK 300
  301 MSGFLLEKGI PLFVSEFGID QRGNNANDNK FLSCFMALAA DRDLDWSLWT LAGSYYIREK 360
  361 SIGSDESYGV LDFNWSSIRN STILQMISAI QTPFIGPGLM ETQPKKIMFH PSTGLCIVRK 420
  421 SLFQLKLGSC NRSESWRLSS HRVLSLAEEQ ILCLKAYEKG KSVKLRLFFS ESYCSKWKLF 480
  481 SDSKMQLSSI TKNGFSVCLD VDTENNNIVT NSCKCLRGNS SCDPRSQWFK LVTSTRRRSR 540
  541 PKPFLQISLY SKTFLQKSLS V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle