YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15230305, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVAFATSS PPLISSVRTL RRHFSVFAAA NPEMSRPSHH SSLEVIGGGS DRFLPSLKDS  60
   61 LAKPYNAFPL IGFNRHVETI YASFFRSVPF VRLRRECLRT KDNGSVALDW VAGEDRHFPP 120
  121 DSPILILLPG LTGGSQDSYV RHMLLRAQSK KWRCVVFNSR GCGDSPVTTP QFYSASFLGD 180
  181 IGEVIDHVVD KFPKANLYAA GWSLGGNILV NYLGQESHNC PLTAAVSLCN PFDLVIADED 240
  241 FHKGFNNVYD KALSKSLRRI FSKHSLLFED IGGEFNIPLA ANAETVRDFD DGLTRVSFGF 300
  301 KSVDEYYSKS SSSKAIKHVR IPLLCIQAAN DPIAPERGIP RDDIKANPNC VLIVTPRGGH 360
  361 LGWVAGEEAP NGAPWTDQVV MEFLQHVENR ETINGERSFE DVHDQIQV

Type	Start	End	Confidence
Signal Peptide	1	19	0.65
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	408	0.99