YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2829864, gi\|7...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFLLFFAPS PVSAGFYTNS SAIPPQLLRN ATGNPWNSFL NFTGCHAGKK YDGLYMLKQY  60
   61 FQHFGYITET NLSGNFTDDF DDILKNAVEM YQRNFQLNVT GVLDELTLKH VVIPRCGNPD 120
  121 VVNGTSTMHS GRKTFEVSFA GRGQRFHAVK HYSFFPGEPR WPRNRRDLTY AFDPRNALTE 180
  181 EVKSVFSRAF TRWEEVTPLT FTRVERFSTS DISIGFYSGE HGDGEPFDGP MRTLAHAFSP 240
  241 PTGHFHLDGE ENWIVSGEGG DGFISVSEAV DLESVAVHEI GHLLGLGHSS VEGSIMYPTI 300
  301 RTGRRKVDLT TDDVEGVQYL YGANPNFNGS RSPPPSTQQR DTGDSGAPGR SDGSRSVLTN 360
  361 LLQYYFWIIF GLFLYLV

Type	Start	End	Confidence
Signal Peptide	1	14	0.82
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	377	0.94