YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GUN21_ARATH
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGRDPWGGP LEINAADSMT DDDRSRNLQD LDRATPSRPL DETQQSWLLG PKVLKKKKYV  60
   61 DLGCILVSRK IFLWTLGTIV VTALLSGFIT LIVKTLPHHH HKEPPPDNYT IALRTALKFF 120
  121 NAQQSGKLPK NIYNVSWRHD SCLQDGKGDP GQCYKDLVGG YYDAGDSIKF NFPMSYAMTM 180
  181 LSWSVIEYSA KYQAAGELEH VKELIKWGTD YFLKTFNSSA DNIYVMVEQV GSGVSGRGSE 240
  241 LHNDHYCWMR PEDIHYKRTV SQCYSSCSDL AAEMAAALAS ASIVFKDNRL YSKNLVHGAK 300
  301 TLYRFATTSR NRYSQNGKES SKFYNSSMFE DELLWGGAWL YYATGNVTYL ERVTSHHMAE 360
  361 KAGAFGNSPY YGVFSWDNKL PGAQLLLTRM RLFLSPGYPY EDMLSEFHNQ TGRVMCSYLP 420
  421 YYKKFNRTNG GLIQLNHGAP QPLQYVANAA FLAALFSDYL EAADTPGWYC GPNFYTTEFL 480
  481 RNFSRSQIDY ILGKNPRKMS YVVGYGQRYP KQVHHRGASI PKNMKETCTG GFKWKKSKKN 540
  541 NPNAINGAMV AGPDKHDGFH DIRTNYNYTE PTLAGNAGLV AALVALSGEK AVGGIDKNTM 600
  601 FSAVPPLVMA TPPPPAPWTP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle