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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME24_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPYGKVDE REHVRLEARR KTRKNIAIIA VSLVILAGIV IGAVFGTMAH KKSPETVETN  60
   61 NNGDSISVSV KAVCDVTLHK EKCFETLGSA PNASSLNPEE LFRYAVKITI AEVSKAINAF 120
  121 SSSLGDEKNN ITMNACAELL DLTIDNLNNT LTSSSNGDVT VPELVDDLRT WLSSAGTYQR 180
  181 TCVETLAPDM RPFGESHLKN STELTSNALA IITWLGKIAD SFKLRRRLLT TADVEVDFHA 240
  241 GRRLLQSTDL RKVADIVVAK DGSGKYRTIK RALQDVPEKS EKRTIIYVKK GVYFENVKVE 300
  301 KKMWNVIVVG DGESKSIVSG RLNVIDGTPT FKTATFAVFG KGFMARDMGF INTAGPSKHQ 360
  361 AVALMVSADL TAFYRCTMNA YQDTLYVHAQ RQFYRECTII GTVDFIFGNS ASVLQSCRIL 420
  421 PRRPMKGQQN TITAQGRTDP NMNTGISIHR CNISPLGDLT DVMTFLGRPW KNFSTTVIMD 480
  481 SYLHGFIDRK GWLPWTGDSA PDTIFYGEYK NTGPGASTKN RVKWKGLRFL STKEANRFTV 540
  541 KPFIDGGRWL PATKVPFRSG L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle