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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK33_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKTKKISFL IFWVVLISII GAISSQQCNE TGYFEPWKTY DTNRRQILTS LASKVVDHYG  60
   61 FYNSSIGKVP DEVHVMGMCI DGTEPTVCSD CLKVAADQLQ ENCPNQTEAY TWTPHKTLCF 120
  121 ARYSNSSFFK RVGLHPLYME HSNVDIKSNL TYLNTIWEAL TDRLMSDASS DYNASLSSRR 180
  181 YYAANVTNLT NFQNIYALML CTPDLEKGAC HNCLEKAVSE YGNLRMQRGI VAWPSCCFRW 240
  241 DLYPFIGAFN LTLSPPPGSK RNISVGFFVA IVVATGVVIS VLSTLVVVLV CRKRKTDPPE 300
  301 ESPKYSLQYD LKTIEAATCT FSKCNMLGQG GFGEVFKGVL QDGSEIAVKR LSKESAQGVQ 360
  361 EFQNETSLVA KLQHRNLVGV LGFCMEGEEK ILVYEFVPNK SLDQFLFEPT KKGQLDWAKR 420
  421 YKIIVGTARG ILYLHHDSPL KIIHRDLKAS NILLDAEMEP KVADFGMARI FRVDQSRADT 480
  481 RRVVGTHGYI SPEYLMHGQF SVKSDVYSFG VLVLEIISGK RNSNFHETDE SGKNLVTYAW 540
  541 RHWRNGSPLE LVDSELEKNY QSNEVFRCIH IALLCVQNDP EQRPNLSTII MMLTSNSITL 600
  601 PVPQSPVYEG MDMFLPSIKS LPGSVNDSLI DDLVPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle