YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7270552, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALFSLHLPR YASVLGFILL LLRDGVKCTT FTLVNKCDFP VWPGILSGSG SPKLDSTGFE  60
   61 LSKDTSRTFR APADFYDVSL VDGYNLPMIV EGSGLCPTTG CVTDLNQNCP TELKAKRSLA 120
  121 CRSACEAFGR PEYCCSGAYG SPDSCKPSMY SQVFKSACPK SYSYAYDDAT STFTCSGADY 180
  181 TITFCPKLSR

Type	Start	End	Confidence
Signal Peptide	1	28	0.94
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	190	0.99