YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10177254, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAWNFIKHF PCKNLSRHIL RDSRVRPLCF FTSSTPPSSF SIFASLSTSS SSSSSSSCFT  60
   61 DESFAAPYLS VRIHCPKHAL DPFSEALLCF GASSVAVDEA IEEADQDETS LASKEICIES 120
  121 IFPVHEEVKM CISQAANSIG LKEIPKFKVE MGDELDWITK NQDLFQPVEI AERLWIVPEW 180
  181 TSPPVAEAVN IILNPGFAFG TGEHPTTKLC LLLLQSLIKG GEAFLDYGTG SGILAIAALK 240
  241 FGAASSVGVD IDPLAINSAI HNAALNNIPL EKLELHLAPI ENSSSGREIP LQKEQFDVVI 300
  301 ANILLNPVMN LADHILSFVK PGATIGISGI LSEQLPNVRE RYSPFLEDIS VATIGDWVCM 360
  361 SGTKKEEFID N

Type	Start	End	Confidence
Signal Peptide	1	56	0.71
N-region	1	47
H-region	48	53
C-region	54	56
Cleavage Site	56	57
Non-Cytoplasmic	57	371	0.99