YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ACFR4_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSVDPSRLS LVLFARLSGL VVAVSVLYWA LFLPNLGLSY STLHPLLMVI GFILVSGEAI  60
   61 LIHRWLPGSR KTKKAVHLWL QGMALASAVF GIWTKFHYQR GVFANFYSLH SWMGLLSVSL 120
  121 FAAQWVTGFM SFWHRGEVRT TRTTFLPWHV FLGLYTYGLA IATAETGLLE KLTFLQTKRN 180
  181 VPRRGSESMT VNGLGLGLAL LGCIVITAAI LPKYQSHSRD EKLVYSSQDR PKCLSS

Type	Start	End	Confidence
Cytoplasmic	1	11	0.94
Transmembrane Helix	12	32	0.96
Non-Cytoplasmic	33	42	0.82
Transmembrane Helix	43	66	0.87
Cytoplasmic	67	74	0.96
Transmembrane Helix	75	96	0.90
Non-Cytoplasmic	97	110	0.84
Transmembrane Helix	111	133	0.87
Cytoplasmic	134	144	0.90
Transmembrane Helix	145	164	0.88
Non-Cytoplasmic	165	190	0.84
Transmembrane Helix	191	212	0.89
Cytoplasmic	213	236	0.89