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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25296022, gi|...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQEAAPTGP PNRELYALLN LSPEASDEEI RKAYRQWAQV YHPDKIQSPQ MKEVATENFQ  60
   61 RICEAYEILS DETKRLIYDL YGMEGLNSGL ELGPRLSKAD EIKEELERIK RRNEEAKKMA 120
  121 HFQPTGSILF NLSVPHFLVG DGIMRGMVMA SQVQSQLSKD DAIAIGGNLA ANEKSGGGVA 180
  181 TAILRRQISP VSSIEFVAST GLQSLIGVQT TRQLTIHSTA TINISKSLSD GSINLTNTWT 240
  241 RQLSETSSGN IELALGMRSA ITVGWKKRDE NVSAAGDFKI ESGGLGASAR YTRKLSSKSH 300
  301 GRIVGRIGSN ALEIELGGGR QISEFSTVRM MYTVGLKGIF WKVELHRGSQ KLIVPILLSA 360
  361 HLAPVFATGA FIVPTSLYFL LKKFVVKPYL LKREKQKALE NMEKTWGQVG EARARAEKAQ 420
  421 QLLQTVATRK KNRQVETDGL IVTKALYGDP KAIERRNEGV EGLDSGVIDV TVPMNFLVSD 480
  481 SGQLKLHEGV KKSGIMGFCD PCPGQPKQLY IAYTYHSQPF EVIVGDYEEL SIPQEGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle