YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9758203, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSLSHLC SCTSSLHHPL SHSISANLTS KTNLSFQFLA NRQSPLLSST PRSLTVIAGA  60
   61 TAPSKLRGKT KKVVGIVKMN VWAGKATLAP PDQSFTFILK TPPTSFLLLK AAGVKKGSKD 120
  121 PKQIKVGMIT IDQVRKIAEV KLPELNCTTI VSTMRTIAGT AGNMGIDIDP PILEPKNKVA 180
  181 LL

Type	Start	End	Confidence
Signal Peptide	1	26	0.90
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	182	0.99