YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10120435, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQRLLLFLL IALLLQSSFL LEISSALKEG KTCITNSNCD AGLHCETCIA NTDFRPRCSR  60
   61 TQPINPITKA KGLPFNKYSW LTTHNSFARL GEVSRTGSAI LAPTNQQDSI TSQLNNGVRG 120
  121 FMLDMYDFQN DIWLCHSFDG TCFNFTAFQP AINILREFQV FLEKNKEEVV TIIIEDYVKS 180
  181 PKGLTKVFDA AGLRKFMFPV SRMPKNGGDW PRLDDMVRKN QRLLVFTSDS HKEATEGIAY 240
  241 QWKYMVENQY GNGGLKVGVC PNRAQSAPMS DKSKSLVLVN HFPDAADVIV ACKQNSASLL 300
  301 ESIKTCYQAA GQRWPNFIAV DFYKRSDGGG APQAVDVANG NLICGCDNFA ACKADGKCG

Type	Start	End	Confidence
Signal Peptide	1	25	0.92
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	359	0.99