YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10177356, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQLLFLVLF VEGAIAFLLL IKIGPLRELV IKSLDQMKMG KGPATVKTIA GTMSVILFSN  60
   61 LMSIVKIQNK GAKLGTMSPM DQVLWRTHLL EASLLGVVLF LGFIIDRMHH YLRKLINLRS 120
  121 NVGSSKEELE QLQKERTELK EKEEKASKEI KQLQVKLSSI TERLKKAETE SKEKEKKLET 180
  181 AETHVTALQK QSAELLLEYD RLLEDNQHLQ SQILGKTKS

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.89
Transmembrane Helix	5	26	0.88
Cytoplasmic	27	43	0.92
Transmembrane Helix	44	65	0.90
Non-Cytoplasmic	66	83	0.90
Transmembrane Helix	84	105	0.89
Cytoplasmic	106	219	0.95