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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7327815, gi|1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSLLLVLFL VRAHVATTET TTEFIFHGFK GNQSEIHMQG DSTITSNGLL RLTDRNSDVV  60
   61 GTAFYHKPVR LLDSNSTNTT VRSFSTSFIF IIPSSSTSNG GFGFTFTLSP TPNRTDADPE 120
  121 QYMGLLNERN DGNSSNHVFA VEFDTVQGFK DGTNRIGNHI GLNFNSLSSD VQEPVAYFNN 180
  181 NDSQKEEFQL VSGEPIQVFL DYHGPTKTLN LTVYPTRLGY KPRIPLISRE VPKLSDIVVD 240
  241 EMFVGFTAAT GRHGQSSAHY VMGWSFASGG EHPLAAMLDI SQLPPPPPNK AKKRGYNGKV 300
  301 IALIVALSTV ISIMLVLLFL FMMYKKRMQQ EEILEDWEID HPHRFRYRDL YKATEGFKEN 360
  361 RVVGTGGFGI VYRGNIRSSS DQIAVKKITP NSMQGVREFV AEIESLGRLR HKNLVNLQGW 420
  421 CKHRNDLLLI YDYIPNGSLD SLLYSKPRRS GAVLSWNARF QIAKGIASGL LYLHEEWEQI 480
  481 VIHRDVKPSN VLIDSDMNPR LGDFGLARLY ERGSQSCTTV VVGTIGYMAP ELARNGNSSS 540
  541 ASDVFAFGVL LLEIVSGRKP TDSGTFFIAD WVMELQASGE ILSAIDPRLG SGYDEGEARL 600
  601 ALAVGLLCCH HKPESRPLMR MVLRYLNRDE DVPEIHDNWG YSDSSRTDLG SKLVGYISSD 660
  661 RASSSHSHTS SSLTRISSTS LISGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle