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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME16_ARATH
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSISNH KIPNTLMFLV IVNFLYLIQT NSAVSISSNS NSHFSRFSRH RSSPSSKTKQ  60
   61 GFLATVQESM NHALLARSLA FNLTLSHRTV QTHTFDPIHD CLELLDDTLD MLSRIHADND 120
  121 EEDVHTWLSA ALTNQDTCEQ SLQEKSESYK HGLAMDFVAR NLTGLLTSSL DLFVSVKSKH 180
  181 RKLLSKQEYF PTFVPSSEQR RLLEAPVEEL NVDAVVAPDG SGTHKTIGEA LLSTSLASSG 240
  241 GRTKIYLKAG TYHENINIPT KQKNVMLVGD GKGKTVIVGS RSNRGGWTTY KTATVAAMGE 300
  301 GFIARDMTFV NNAGPKSEQA VALRVGADKS VVHRCSVEGY QDSLYTHSKR QFYRETDITG 360
  361 TVDFIFGNSA VVFQSCNIAA RKPLPGQRNF VTAQGRSNPG QNTGIAIQNC RITAESMTYL 420
  421 GRPWKEYSRT VVMQSFIGGS IHPSGWSPWS GGFGLKSLFY GEYGNSGPGS SVSGRVKWSG 480
  481 CHPSLTVTEA EKFTVASFID GNIWLPSTGV SFDPGLVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle