YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15225275, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFSGYSFIV LTLLSIVLTQ IYGLRSFSRM DDLQPAETLA VHNQIRAADQ KLAAHAQRYA  60
   61 NVRSQDCAMK YSTDGTYGEN IAAGWVQPMD TMSGPIATKF WFTEKPYYNY ATNKCSEPCG 120
  121 HYTQIVANQS THLGCGTVRC FKNEYVWVVC NYAPRPMGDA NTRPY

Type	Start	End	Confidence
Signal Peptide	1	23	0.82
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	165	0.92