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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CAF2M_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSIRRSLTL AKEPKDLFLF LCNLRARCVS TDDYDPPFSP LSKPTKPPKE KKKQKTKKQD  60
   61 QSSELVNDLK IPVISDLPFD FRYSYSETNP EIEPIGFREP KRFSPFGPGR LDRKWTGTTA 120
  121 LASPEIDQSQ WVEERARVLG ETLTEDEVTE LIERYRHSDC TRQINLGKGG VTHNMIDDIH 180
  181 NHWKKAEAVR IKCLGVPTLD MDNICFHLEE KSGGKIVYRN INILVLYRGR NYDPKSRPII 240
  241 PLMLWKPHPP IYPRLVKNVA DGLEFEETKE MRNRGLHSPA LMKLTRNGVY VNVVGRVREE 300
  301 FETEEIVRLD CTHVGMSDCK RIGVKLKEMV PCVPILFKDE QIILWRGKRT GEEELVTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle