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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP16_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSWIPKLLL LQLVLLLTKH ADSSSIIKYL PGFEGPLPFE LETGYIGVGE EDEDQMFYYF  60
   61 IKSESNPKTD PLLLWLSGGP GCSSFTGLIY ENGPLGFKVE AYNGSIPTLV STTYSWTKVA 120
  121 NIIYLDQPVG TGFSYSRNPL ADIPSDTGSA KRVDEFLRKW LTKHPEYFSN PFYAGGNSYS 180
  181 GKMVPVIVQE ISNGNCIYGK PQIRLQGYVL GSPVTDYDLD RNSRIQFAHG MALISNELYE 240
  241 SMKRTCGGNY IFVDPLNTEC LELIKDYDNC VSGIYENLIL VPKCDLTSPD CHSYRSMLSD 300
  301 YWANNESVRR ALKVVEGTTG RWERCKWTLQ NNKDIKSSIP YHKKNSIQGY RSLIFSGDHD 360
  361 MLTPYVGTQD WIRSLNYSII DKWRPWMILD QVAGYTTTYA NKMTFATVKG GGHTLDYKPD 420
  421 ENSILFKRWI SGQLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle