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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9279724
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRRFLSSIS ATAGNTKTLN QGRWSVKQVK KSNFHVTLDE IRTSIDSSDF IALSLQNTGS  60
   61 YAAAWHRVSA IDTPQTSYLK AKYAAERYQI LQFALCPFSL QGSKLTVHPY NFHLFPRDEL 120
  121 KCGMPSYSFS CQASRLTAMA REGFDFNICI YEGISYLSRA QESASKFLSE NPILADSVTV 180
  181 SSSPATVADT VFVGRIRSRV KNWRQSCIDS GSKTGDDDLV SSLRRLVLGS EQYGSRLCLT 240
  241 IDVCSERQVQ LILEMLTEFS DDVVPLLVAS KSRGTQAVRT VFMSSKEDKD LFKRELKDLE 300
  301 KEENRRVRGF REVVDFISSS QKPVVSQNYL SDFTSIHAKF LGPLPSNVDD FSSSLSSAFP 360
  361 NVVDLSQFMK EISPLSNISN LPAAMSSLNR FFAPVDVEVA NQGCPVKLDE GHQSHGQNAV 420
  421 MISQLFAKLC TIQKSDLSTI QSNEDFQALA SDEHANSVTS CSKNAGDENV KVWSKNSRRV 480
  481 SSENLVFIWG LGKKMTAAKL KNVLQKSHPV FAREFDVKYI DRSSAILVFW ESGPSETFLS 540
  541 AVNNEEQLDG SLREMVAEGL RGAGYETYKR ACRLGFWEAD LAESLDKALE SSDTDPDSDT 600
  601 KPSEIDCFFE SCKKTKEARI TEIEPKIDPK TIEPNQTEIL VWPWLNPVYG PVIVASLREE 660
  661 AESVKHRRRE EMGFLTAAIR VSTSAASMLL RRKSRQLGFL ASSSPLFSSF NSMNRTISSC 720
  721 NIVCKVLHKE SLTRPMWNVS FLRSSSFHST PARETGDDDI SKSENSSSQD GDSCTKLKRK 780
  781 KLKGKRAVVR WLKFFRWKKK KEFERMTSEE KILNKLRKAR KKEERLMETM KKLEPSESAE 840
  841 TTHDPEILTP EEHFYYLKMG LKCKNYVPVG RRGIYQGVIL NMHLHWKKHQ TLQVVIKTFT 900
  901 PDEVKEIAVE LARLTGGIVL DVHEGNTIIM YRGKNYVQPP TEIMSPRITL PRKKALDKSK 960
  961 CRDALRAVRK YIPRLEQELQ LLQAQAETKR DYTNVKVDDN QERSEELKKI IERSEECLED1020
 1021 EQEEDEAGLE LATDSDLSDI FETDSELEDA KTERPLFLEE FEKFPAINNR EDEDFGDLGK1080
 1081 AKSEGEENDD DKSPNFDEVD KMFLRAAFLL KKKRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle