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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12321303, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQNCIAPRP EEDGGVMVQG LPDMSDTQSK SVLAFPTITS QPGLQMSMYP ITLKEVVYKV  60
   61 KIEQTSQCMG SWKSKEKTIL NGITGMVCPG EFLAMLGPSG SGKTTLLSAL GGRLSKTFSG 120
  121 KVMYNGQPFS GCIKRRTGFV AQDDVLYPHL TVWETLFFTA LLRLPSSLTR DEKAEHVDRV 180
  181 IAELGLNRCT NSMIGGPLFR GISGGEKKRV SIGQEMLINP SLLLLDEPTS GLDSTTAHRI 240
  241 VTTIKRLASG GRTVVTTIHQ PSSRIYHMFD KVVLLSEGSP IYYGAASSAV EYFSSLGFST 300
  301 SLTVNPADLL LDLANGIPPD TQKETSEQEQ KTVKETLVSA YEKNISTKLK AELCNAESHS 360
  361 YEYTKAAAKN LKSEQWCTTW WYQFTVLLQR GVRERRFESF NKLRIFQVIS VAFLGGLLWW 420
  421 HTPKSHIQDR TALLFFFSVF WGFYPLYNAV FTFPQEKRML IKERSSGMYR LSSYFMARNV 480
  481 GDLPLELALP TAFVFIIYWM GGLKPDPTTF ILSLLVVLYS VLVAQGLGLA FGALLMNIKQ 540
  541 ATTLASVTTL VFLIAGGYYV QQIPPFIVWL KYLSYSYYCY KLLLGIQYTD DDYYECSKGV 600
  601 WCRVGDFPAI KSMGLNNLWI DVFVMGVMLV GYRLMAYMAL HRVKLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle