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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25406950, gi|...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATEATTVPK FQEPDLRQVS QTPDFKPEIA HDGLKFWQFM IAGSIAGSVE HMAMFPVDTI  60
   61 KTHMQALRPC PLKPVGIREA FRSIIQKEGP SALYRGIWAM GLGAGPAHAV YFSFYEVSKK 120
  121 YLSAGDQNNS VAHAMSGVFA TISSDAVFTP MDMVKQRLQM GEGTYKGVWD CVKRVLREEG 180
  181 IGAFYASYRT TVLMNAPFTA VHFATYEAAK KGLMEFSPDR ISDEEGWLVH ATAGAAAGGL 240
  241 AAAVTTPLDV VKTQLQCQGV CGCDRFTSSS ISHVLRTIVK KDGYRGLLRG WLPRMLFHAP 300
  301 AAAICWSTYE GVLYRRSFNA PNIPNMAVED STAPKFKEQD LQLWQLMIAG SVAGSFKNMT 360
  361 MFPVRTLDQR MLHRSYSQRH VGIRQALRSV IQTEGPSALY RGIWYMRHGA MGPAQFVHFS 420
  421 FYDVSKNFLS TGNPNNPVVH VISWAFTAVW SYAVSTPVDM AKLRHQNGFG NYKGVWDCAK 480
  481 RVTHEEGITF EILDHSKSSH EYLLSKLNSS CCDLHVIRSF GGISTQEETD RDITEKEELV 540
  541 VGSCHRRSHR RWIGSCSDLA AWVYASPECS SMHQQQPYVG PLTRRPNLSF RTSTAIQNGL 600
  601 IKIKRMGQRI DITTTTDSTS DISRLQVIDP IEGSMEENNN AGSDSDSNSV EDSQDYYEPI 660
  661 SAVDLYNSND DEEDSYLPIG GDGLSNGHCM IPDAEVGISS ISINDNTDSE EETETETGPE 720
  721 IRRAFEEDER RRRSPLVEEN AVRVMEAMRA ISFPGTAPDW ASDVNEDRWI DQLRRLRTTS 780
  781 Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle