YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4314384, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTIIFILT IFLSYRTSLA TSRGSLFEAS AIEKHEQWMA RFNRVYSDET EKRNRFNIFK  60
   61 KNLEFVQNFN MNNKITYKVD INEFSDLTDE EFRATHTGLV VPEAITRIST LSSGKNTVPF 120
  121 RYGNVSDNGE SMDWRQEGAV TPVKYQGRCG GCWAFSAVAA VEGITKITKG ELVSLSEQQL 180
  181 LDCDRDYNQG CRGGIMSKAF EYIIKNQGIT TEDNYPYQES QQTCSSSTTL SSSFRAATIS 240
  241 GYETVPMNNE EALLQAVSQQ PVSVGIEGTG AAFRHYSGGV FNGECGTDLH HAVTIVGYGM 300
  301 SEEGTKYWVV KNSWGETWGE NGYMRIKRDV DAPQGMCGLA ILAFYPLA

Type	Start	End	Confidence
Signal Peptide	1	20	0.97
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	348	0.99