YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25288972, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKCSRETLL FIFITISSVA TSTSTWMPMD GNYGASYCLS WRLAVETNNV RAWRIVPLQC  60
   61 LRYVEVYMLA GQYDRDVQLT VDQIKVYLNE IILPGDGMDA WILDVDDTCF SNVFYYRLKR 120
  121 YGCDPYDPTG FRTWAMKGES PAIQPVLELF YKLIETGFKV FLVTGRDEET LRQATLENLH 180
  181 NQGFTGYERL IMRTADNKRQ SATTYKTRIR KEMMEEGYRI WGNVGDQWSD LQGEYSGDRT 240
  241 FKIPNPMYFV P

Type	Start	End	Confidence
Signal Peptide	1	22	0.86
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	251	0.99