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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3695389, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFQSHSHHL LLYQSSSSSS FFFLPKLITK PPLSLSFTSL SSMLPSLSLS TANRHLSVTD  60
   61 TIPLPNSNSN ATPPLRIAII GFGNYGQFLA ETLISQGHIL FAHSRSDHSS AARRLGVSYF 120
  121 TDLHDLCERH PDVVLLCTSI LSIENILKTL PFQRLRRNTL FVDVLSVKEF AKTLLLQYLP 180
  181 EDFDILCTHP MFGPQSVSSN HGWRGLRFVY DKVRIGEERL RVSRCESFLE IFVREGCEMV 240
  241 EMSVTDHDKF AAESQFITHT LGRLLGMLKL ISTPINTKGY EALLDLAENI CGDSFDLYYG 300
  301 LFVYNNNSLE VLERIDLAFE ALRKELFSRL HGVVRKQSFE GEAKKVHVFP NCGENDASLD 360
  361 MMRSEDVVVK YEYNSQVSGS VNDGSRLKIG IVGFGNFGQF LGKTMVKQGH TVLAYSRSDY 420
  421 TDEAAKLGVS YFSDLDDLFE EHPEVIILCT SILSTEKVLE SLPFQRLKRS TLFVDVLSVK 480
  481 EFPRNLFLQT LPQDFDILCT HPMFGPESGK NGWNNLAFVF DKVRIGMDDR RKSRCNSFLD 540
  541 IFAREGCRMV EMSCAEHDWH AAGSQFITHT VGRLLEKLSL ESTPIDTKGY ETLLKLVENT 600
  601 AGDSFDLYYG LFLYNPNAME QLERFHVAFE SLKTQLFGRL HSQHSHELAK SSSPKTTKLL 660
  661 TS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle