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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME33_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.82
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRGIFHICL LASFLLLPFS SAVHDSGFTG GTDAPPPWDH NVSPPPETAP SPTPTSSPST  60
   61 TSPPSPGPVA APSPINNGSV SGDMTWWCNK TPHAETCNYY FRKSSQNNIN LRPPRFRSEF 120
  121 LRMLVKVALD QAVITHSQTV KFGPSCTNNQ RKAAWSDCVN LFQNTVAQLN RTLKGLNPAA 180
  181 SSDVKCTDFD AQTWLSTAQT NIETCRSGSE DLNVSDFVMP VISNKNLSDL IGNCLAVNGV 240
  241 LMKQHDHTTT ANHKEYFPSW VSRHERRLLV SASLAKSSPH LVVAQDRSGH FRSIQAAINF 300
  301 AARRRFKSRF VIYVKKGVYR ENIDVGNDNH NIMLVGDGER KTIITSGRSV QHGYTTYNSA 360
  361 TGGFGGQRFV AKDMTFINTA GPLRGQAVAV RSSSDLSVFY RVGIHGFQDT LYIHSQRQFF 420
  421 RECYISGTID FIFGNAAVVF QNCMILVRRP LHGQANIITA QGRGDPFQNT GITIHSSRII 480
  481 AASDLKPVIR AYKTYLGRPW QAYSRVTIMK TYIDNSISPL GWSPWLRGSN FALNTVFYGE 540
  541 YKNFGPGSST RWRVRWKGFH AITSTAVASR FTVGSLIAGG SWLPATGVPF KSGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle