YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATL69_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPISPPASG VGLGYGIAIA VSILVLISFI MLASYICIRS KSTGRDEATS DVVLDLPSPA  60
   61 AEVKLGLDRP VIESYPRIVL GDSRRLPRPN NGPCSICLCD YEAREPVRCI PECNHCFHTD 120
  121 CVDEWLRTSA TCPLCRNSPA PSRLATPLSD LVPLAFQIR

Type	Start	End	Confidence
Non-Cytoplasmic	1	12	0.84
Transmembrane Helix	13	36	0.89
Cytoplasmic	37	159	0.87