YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LTL1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNINCSPLGF LISLFFIVTF LAPQVKSRAF FVFGDSLVDN GNNDYLVTTA RADNYPYGID  60
   61 YPTRRPTGRF SNGLNIPDII SEAIGMPSTL PYLSPHLTGE NLLVGANFAS AGIGILNDTG 120
  121 IQFVNIIRIS KQMEYFEQYQ LRVSALIGPE ATQQLVNQAL VLITLGGNDF VNNYYLIPFS 180
  181 ARSRQYALPD YVVYLISEYG KILRKLYELG ARRVLVTGTG AMGCAPAELA QHSRNGECYG 240
  241 ALQTAAALFN PQLVDLIASV NAEIGQDVFV AANAYQMNMD YLSNPEQFGF VTSKVACCGQ 300
  301 GPYNGIGLCT PVSNLCPNRD LYAFWDAFHP TEKANRIIVN QILTGSSKYM HPMNLSTAML 360
  361 LDSSKI

Type	Start	End	Confidence
Signal Peptide	1	27	0.94
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	366	0.98