YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GDU4_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPLSIKPTS LDVARHATSV ESFGNHRPPI SPWHSPVPYL FGGLAAMLGL IAFALLILAC  60
   61 SYWRLSTSGD DSGERVDEEK ESRSGVKAAS AACEEKVLVI MAGDDLPRFL ATPAANKCMC 120
  121 GHEGRMVIFK EDGIGAGEEK MGDREKAKEN EETTSQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	38	0.73
Transmembrane Helix	39	60	0.92
Cytoplasmic	61	156	0.74