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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAC5_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVTKSLLCF ISFVAFLLFS SVAEANKAHH HEFIIQATKV KRLCETHNSI TVNGMFPGPM  60
   61 LVVNNGDTLV VKVINRARYN ITIHWHGVRQ MRTGWADGPE FVTQCPIRPG SSYTYRFTIQ 120
  121 GQEGTLWWHA HSSWLRATVY GSLLVFPPAG SSYPFTKPHR NVPLLLGEWW DANPVDVLRE 180
  181 SIRTGGAPNN SDAYTINGQP GDLYKCSSQD TTVVPINVGE TILLRVINSA LNQPLFFTVA 240
  241 NHKLTVVGAD ASYLKPFTTN VIVLGPGQTT DVLITGDQPP NRYYMAARAY QSAQNAPFGN 300
  301 TTTTAILQYK SAPCCGVGGG SGTKKGNSFK PIMPILPAYN DTNTVTRFSQ SFRSLRRAEV 360
  361 PTEIDENLFV TIGLGLNNCP KNFRSRRCQG PNGTRFTASM NNVSFALPSN YSLLQAHHHG 420
  421 IPGVFTTDFP AKPPVKFDYT GNNISRSLYQ PDRGTKLYKL KYGSRVQIVL QDTGIVTPEN 480
  481 HPIHLHGYDF YIIAEGFGNF NPKKDTAKFN LEDPPLRNTV GVPVNGWAVI RFIADNPGVW 540
  541 IMHCHLDAHI SWGLAMAFLV ENGNGVLQTI EQPPHDLPVC 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle