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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25386235, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR  60
   61 HTQLQIQEME AYVFNLLTYF NFLVCFLTIL LFWLLNRFFK ECPHPDDKQR KQLSRELNLE 120
  121 PLQVKFWFQN KRTQMKNHHE RHENSHLRAE NEKLRNDNLR YREALANASC PNCGGPTAIG 180
  181 EMSFDEHQLR LENARLREEI DRISAIAAKY VGKPVSNYPL MSPPPLPPRP LELAMGNIGG 240
  241 EAYGNNPNDL LKSITAPTES DKPVIIDLSV AAMEELMRMV QVDEPLWKSL VLDEEEYART 300
  301 FPRGIGPRPA GYRSEASRES AVVIMNHVNI VEILMDVNQW STIFAGMVSR AMTLAVLSTG 360
  361 VAGNYNGALQ VMSAEFQVPS PLVPTRETYF ARYCKQQGDG SWAVVDISLD SLQPNPPARC 420
  421 RRRASGCLIQ ELPNGYSKVT WVEHVEVDDR GVHNLYKHMV STGHAFGAKR WVAILDRQCE 480
  481 RLASVMATNI SSGEVGESES ESQFYINEYA VITNQEGRRS MLKLAERMVI SFCAGVSAST 540
  541 AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN 600
  601 EWDILSNGGV VQEMAHIANG RDTGNCVSLL RSANSSQSNM LILQESCTDP TASFVIYAPV 660
  661 DIVAMNIVLN GGDPDYVALL PSGFAILPDG NANSGAPGGD GGSLLTVAFQ ILVDSVPTAK 720
  721 LSLGSVATVN NLIACTVERI KASMSCETA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle