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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AED1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIMRNFLSM IIMLCVCLNW CFAEGAEKSD SGKVLDSYTI QVSSLFPSSS SCVPSSKASN  60
   61 TKSSLRVVHM HGACSHLSSD ARVDHDEIIR RDQARVESIY SKLSKNSANE VSEAKSTELP 120
  121 AKSGITLGSG NYIVTIGIGT PKHDLSLVFD TGSDLTWTQC EPCLGSCYSQ KEPKFNPSSS 180
  181 STYQNVSCSS PMCEDAESCS ASNCVYSIVY GDKSFTQGFL AKEKFTLTNS DVLEDVYFGC 240
  241 GENNQGLFDG VAGLLGLGPG KLSLPAQTTT TYNNIFSYCL PSFTSNSTGH LTFGSAGISE 300
  301 SVKFTPISSF PSAFNYGIDI IGISVGDKEL AITPNSFSTE GAIIDSGTVF TRLPTKVYAE 360
  361 LRSVFKEKMS SYKSTSGYGL FDTCYDFTGL DTVTYPTIAF SFAGSTVVEL DGSGISLPIK 420
  421 ISQVCLAFAG NDDLPAIFGN VQQTTLDVVY DVAGGRVGFA PNGC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle