YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6056408, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSILLVLF TLMVMLSISY EPLKWMGINA SHVPETCYHH CNQTFESSRQ CFKWCQELAR  60
   61 KDEYKIYGYP YSTNTRRVLA VLHEKGLSYD PITVNLIAGD QKKPSFLAIN PFGQVPVFLD 120
  121 GGLKLTESRA ISEYIATVHK SRGTQLLNYK SYKTMGTQRM WMAIESFEFD PLTSTLTWEQ 180
  181 SIKPMYGLKT DYKVVNETEA KLEKVLDIYE ERLKNSSFLA SNSFTMADLY HLPNIQYLMD 240
  241 THTKRMFVNR PSVRRWVAEI TARPAWKRAC DVKAWYHKKK N

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	281	0.99