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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAC8_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLHHYLSN QAFLVLLLFS SIASAAVVEH VLHIQDVVVK PLCKEQIIPA ANGSLPGPTI  60
   61 NVREGDTLVV NVINNSTYNV TIHWHGVFQL KSVWMDGANM ITQCPIQPGY NFTYQFDITG 120
  121 QEGTLLWHAH VVNLRATLHG ALVIRPRSGR PYPFPKPYKE VPIVFQQWWD TDVRLLQLRP 180
  181 APVSDAYLIN GLAGDSYPCS ENRMFNLKVV QGKTYLLRIV NAALNTHLFF KIANHNVTVV 240
  241 AVDAVYSTPY LTDVMILTPG QTVDALLTAD QAIGKYYMAT LPYISAIGIP TPDIKPTRGL 300
  301 IVYQGATSSS SPAEPLMPVP NDMSTAHRFT SNITSLVGGP HWTPVPRHVD EKMFITMGLG 360
  361 LDPCPAGTKC IGPLGQRYAG SLNNRTFMIP ERISMQEAYF YNISGIYTDD FPNQPPLKFD 420
  421 YTKFEQRTNN DMKMMFPERK TSVKKIRFNS TVEIVLQNTA IISPESHPMH LHGFNFYVLG 480
  481 YGFGNYDPIR DARKLNLFNP QMHNTVGVPP GGWVVLRFIA NNPGVWLFHC HMDAHLPYGI 540
  541 MSAFIVQNGP TPETSLPSPP SNLPQCTRDP TIYDSRTTNI DLSY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle