YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9757831, gi\|8...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHSLSFIST NLNSLVLNHH QCQSFGTFVS SPFKRKRRFA RSIRALQETE GPTPRRLIDI  60
   61 IRSVPEISRN YFKKPSRRTL FGGISLLGGF YVAQTISLSF GALGVNDVIA AVLCVLLTEY 120
  121 VTRFYYSRTT VTFPIALLNN FKMGFTYGLF IDAFKLAS

Type	Start	End	Confidence
Cytoplasmic	1	78	0.93
Transmembrane Helix	79	98	0.89
Non-Cytoplasmic	99	107	0.55
Transmembrane Helix	108	126	0.69
Cytoplasmic	127	158	0.47