YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GDL89_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLVIQTTI VLVSVISVSI VHAGNIPAVI AFGDSILDTG NNNYLMTLTK VNFYPYGRDF  60
   61 VTRRATGRFG NGRIPTDLIA EGLGIKNIVP AYRSPFLEPN DILTGVSFAS GGSGLDPMTA 120
  121 RIQGVIWVPD QLNDFKAYIA KLNSITGDEE KTRSIISNAV FVISAGNNDI AITYFTNPIR 180
  181 NTRYTIFSYT DLMVSWTQSF IKELYNLGAR KFAIMGTLPL GCLPGASNAL GGLCLEPANA 240
  241 VARLFNRKLA DEVNNLNSML PGSRSIYVDM YNPLLELVKN PLRSGFISPT RPCCCAPAAP 300
  301 IPCLDASRYV FWDIAHPSEK AYQTIIPPII QQIQQSFA

Type	Start	End	Confidence
Signal Peptide	1	23	0.96
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	338	0.99