YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7269266, gi\|5...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEISKTKV GSSSTASVAD SSAAASAATN AAKSRWKILW PNSLRWIPTS TDYIIAAEKR  60
   61 LLSILKTPYV QEQVSIGSGP PGSKIRWFRS TSNESRYINT VTFDAKEGAP TLVMVHGYGA 120
  121 SQGFFFRNFD ALASRFRVIA IDQLGWGGSS RPDFTCRSTE ETEAWFIDSF EEWRKAQNLS 180
  181 NFILLGHSFG GYVAAKYALK HPEHVQHLIL VGSAGFSAEA DAKSEWLTKF RATWKGAVLN 240
  241 HLWESNFTPQ KLVRGLGPWG PGLVNRYTTA RFGAHSEGTG LTEEEAKLLT DYVYHTLAAK 300
  301 ASGELCLKYI FSFGAFARKP LLQSASEWKV PTTFIYGMND WMNYQGAVEA RKSMKVPCEI 360
  361 IRVPQGGHFV FIDNPIGFHS AVLYACRKFI SQDSSHDQQL LDGLRLV

Type	Start	End	Confidence
Signal Peptide	1	27	0.83
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	407	0.99