YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LRX2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLFPSTSLR LFFFLFLLFS SCFLQIRGDD DDDDISDDNI KVDPSLKFEN PSLRQAYIAL  60
   61 QSWKQAIFSD PFNFTANWNG SDVCSYNGIF CAPSPSSPKT RVVAGIDLNH ADMAGYLPRE 120
  121 LGLLTDLALF HLNSNRFCGE VPLTFKHMKL LFELDLSNNR FVGKFPNVVL SLPSLKFLDL 180
  181 RYNEFEGSIP SKLFDKELDA IFLNHNRFMF GIPENMGNSP VSALVLADND LGGCIPGSIG 240
  241 LMGKTLNEII LSNDNLTGCL PPQIGNLKNV TVFDISFNRL SGPLPSSIGN MKSLEQLNVA 300
  301 NNRFTGVIPS SICQLSNLEN FTYSSNFFTG DAPRCVALLG DNVVVNGSMN CIDGKEDQRS 360
  361 SKECSSPASR SVDCSKFGCN NFFSPPPPSF KMSPTVRVLP PPPPSSKMSP TFRATPPPPS 420
  421 SKMSPSFRAT PPPPSSKMSP SFRATPPPPS SKMSPSVKAY PPPPPPPEYE PSPPPPSSEM 480
  481 SPSVRAYPPP PPLSPPPPSP PPPYIYSSPP PPSPSPPPPY IYSSPPPVVN CPPTTQSPPP 540
  541 PKYEQTPSPR EYYPSPSPPY YQYTSSPPPP TYYATQSPPP PPPPTYYAVQ SPPPPPPVYY 600
  601 PPVTASPPPP PVYYTPVIQS PPPPPVYYSP VTQSPPPPPP VYYPPVTQSP PPSPVYYPPV 660
  661 TQSPPPPPVY YLPVTQSPPP PSPVYYPPVA KSPPPPSPVY YPPVTQSPPP PSTPVEYHPP 720
  721 ASPNQSPPPE YQSPPPKGCN DSPSNDHHYQ TPTPPSLPPP YYEDTPLPPI RGVSYASPPP 780
  781 PSIPYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle