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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6016696
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSNCDGNLK AEIEESNGSS GKNTKVPPCP LDVSTSRRTL IGDGKPRRWS ISALPDASSR  60
   61 FQLLKFGSPS AKFKKMAEDR DEVSRSVTSS SNGSSHNFRE RISGVLHRKI DWSSLMNMGK 120
  121 EWIRNPINMA LFVWILVVAV SGAILFMVMT GMLNHALPKK SQRDAWFEVN NQILNGLFTL 180
  181 MCLYQHPKRF YHLVLLCRWK HDDITKLRKA YCKDGTYKPN EWMHIMVVVI LLHLNCFAQY 240
  241 ALCGLNVGYR RSERPPIGVA ICISAAIGAP AVADYNDSNE DEENQLKQRE EGSVNRRFTL 300
  301 ERRYSFASAS TGVGDGMVPV SDPQWSAQEV RTANSYEIVE DKFCQRKEEK NMVSPNLVSP 360
  361 LPREDETRQE LDTLAESEIK NRDVVLKLYE ALRSRDVKSV HQILTPDLEY WFHGPPPHQF 420
  421 LMRVLTGGVS PSSSSFEFVP LSVVSFGSTV IAEGCDAATS ISWIHAWTVA NGIITQVREY 480
  481 SNTSLTVTRI GNVVAGRRSA EIAPPSHCSS VWESQFSGRA GKPVPGLVLA I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle