YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22136330, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRRLLSII STSLINSSFH QTAKPRFIIS SPLLQCRPSP ISTQIPTSTS RALSFQGIRA  60
   61 YSLLSLNDLR DNVPRKLKTR KGRGIGSGKG KTAGRGHKGQ KARGTMKFGF EGGQTPLRRR 120
  121 LPKRGFKNKF KLHFQPVGLG KIAKLINAGK IDSHELITMK TLKDVGAIGK QIEDGVRLMG 180
  181 RGADDIKWPL HFEVSRVTVR AKEVVEAAGG SVRRVYYNKL GLRALLKPEW FEKKGRLLPK 240
  241 AARPPPKQQD KVDSIGRLPA PKKPIPFFAA EETKVESPVE S

Type	Start	End	Confidence
Signal Peptide	1	22	0.91
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	281	0.99