YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GDL24_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLQILLLAL VLIAVEANAV KQGINATIPA LIVFGDSIMD TGNNNNLPTL LKCNFPPYGK  60
   61 DYPGGDATGR FSDGRVPSDL IAEKLGLAKT LPAYMNSYLK PEDLLKGVTF ASRGTGYDPL 120
  121 TAKIMSVISV WDQLIYFKEY ISKIKRHFGE EKAKDILEHS FFLVVSSSND LAHTYLAQAH 180
  181 RYDRTSYANF LADSAVHFVR ELHKLGARKI GVFSAVPVGC VPLQRTVFGG FFTRGCNEPL 240
  241 NNMAKQFNAR LSPALDSLDK ELDGVILYIN VYDTLFDMIQ HPKKYGCCGK GLLTISYLCN 300
  301 SLNPFTCSNS SSYIFWDSYH PSERAYQVIV DNLLDKYLSK VY

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	342	0.99