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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LRKS5_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.59
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSLAWKLL FLILTCKIET QVKCLKFDFP GFNVSNELEL IRDNSYIVFG AIQVTPDVTG  60
   61 GPGGTIANQA GRALYKKPFR LWSKHKSATF NTTFVINISN KTDPGGEGLA FVLTPEETAP 120
  121 QNSSGMWLGM VNERTNRNNE SRIVSVEFDT RKSHSDDLDG NHVALNVNNI NSVVQESLSG 180
  181 RGIKIDSGLD LTAHVRYDGK NLSVYVSRNL DVFEQRNLVF SRAIDLSAYL PETVYVGFTA 240
  241 STSNFTELNC VRSWSFEGLK IDGDGNMLWL WITIPIVFIV GIGAFLGALY LRSRSKAGET 300
  301 NPDIEAELDN CAANPQKFKL RELKRATGNF GAENKLGQGG FGMVFKGKWQ GRDIAVKRVS 360
  361 EKSHQGKQEF IAEITTIGNL NHRNLVKLLG WCYERKEYLL VYEYMPNGSL DKYLFLEDKS 420
  421 RSNLTWETRK NIITGLSQAL EYLHNGCEKR ILHRDIKASN VMLDSDFNAK LGDFGLARMI 480
  481 QQSEMTHHST KEIAGTPGYM APETFLNGRA TVETDVYAFG VLMLEVVSGK KPSYVLVKDN 540
  541 QNNYNNSIVN WLWELYRNGT ITDAADPGMG NLFDKEEMKS VLLLGLACCH PNPNQRPSMK 600
  601 TVLKVLTGET SPPDVPTERP AFVWPAMPPS FSDIDYSLTG SQINSLTELT GR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle