YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25365957, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARIRRRIQK RHIHENRYID FFGERLIVTV THTTSTIRRW IHSIRFFSRL RSSHPLVVGL  60
   61 DVQWTPGGSD PPPDILQLCV GNRCLIIQLS HCKRIPEVLR SFLEDETITF VGVWNSQDQG 120
  121 KLERFRHQLE IWRLLDIRHY LPTRLLNSSF EKIVEECLGY KGVRKDKEIC MSNWGARSLS 180
  181 HDQIVQASDD VYVCCKLGVK ECIWKERSNV KERIWKESSN VKEHIWKESS KLYFVGVCF

Type	Start	End	Confidence
Cytoplasmic	1	20	0.81
Transmembrane Helix	21	42	0.78
Non-Cytoplasmic	43	239	0.99