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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9797766, gi|2...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQGELKSFV QNSRPNPKSP TVSPFRCELY INLVMSFYFV ICSLLTLSVI VLKPVEKRLV  60
   61 EEVQKNDILI IVGETGSGKT TQLPQFLYNA GFCREGKMIG ITQPRRIAAV TVAKRVAEEC 120
  121 EVQLGQKVGY SIRFDDTTSG STRLKYMTDG LLLREALLDP HLSRYSVIIV DEAHDRSVHT 180
  181 DVLLALLKKI QRTRSQPVSE KTEFGNVASQ VQTTTRDANG PQQNGVLKGY QGRKLSPLKL 240
  241 IIMSASLDAR VFSEYFGGAK AVHVQGRQFP VDILYTVHPE SDYVDATLVT IFQIHFEEKP 300
  301 GDILVFLTGQ DEIESVERLV QERLQNIPED KRKLLPLAIF SALPSEQQMK VFAPAPTGFR 360
  361 KVILATNIAE TSITIPGIRY VIDPGFVKAR SYDPSKGMES LDVVPASKAQ TLQRSGRAGR 420
  421 EGPGKSFRLY PEREFEKLED STKPEIKRCN LSNIILQLKA LGIDDIVGFD FIDKPSRGAI 480
  481 IKALAELHSL GALADDGKLE NPVGYQMSRL PLEPVYSKAL ILANQFNCLE EMLITVAVLS 540
  541 VESIFYDPRE KREEARTSKN HFASVEGDHL TYLSVYRESD EFLEKRKAAG SGNNIDKIMK 600
  601 KWCKENYVNS RSLKHARDIY RQIREHVEQI GFNVSSCGND MLAFRRCLAA SFFLKAAQRQ 660
  661 LDGTYRALES GEVVHIHPTS VLFRAKPECV IFNELMQTSK KYIKNLTIID SLWLSELAPH 720
  721 HFQTAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle