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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ODPB2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIIHGAGA ATTTLSTFNS VDSKKLFVAP SRTNLSVRSQ RYIVAGSDAS KKSFGSGLRV  60
   61 RHSQKLIPNA VATKEADTSA STGHELLLFE ALQEGLEEEM DRDPHVCVMG EDVGHYGGSY 120
  121 KVTKGLADKF GDLRVLDTPI CENAFTGMGI GAAMTGLRPV IEGMNMGFLL LAFNQISNNC 180
  181 GMLHYTSGGQ FTIPVVIRGP GGVGRQLGAE HSQRLESYFQ SIPGIQMVAC STPYNAKGLM 240
  241 KAAIRSENPV ILFEHVLLYN LKEKIPDEDY VCNLEEAEMV RPGEHITILT YSRMRYHVMQ 300
  301 AAKTLVNKGY DPEVIDIRSL KPFDLHTIGN SVKKTHRVLI VEECMRTGGI GASLTAAINE 360
  361 NFHDYLDAPV MCLSSQDVPT PYAGTLEEWT VVQPAQIVTA VEQLCQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle