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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: E1313_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARDFKLIFS ISILLLLLDC CYGGKVGVCY GRSADDLPTP SKVVQLIQQH NIKYVRIYDY  60
   61 NSQVLKAFGN TSIELMIGVP NSDLNAFSQS QSNVDTWLKN SVLPYYPTTK ITYITVGAES 120
  121 TDDPHINASS FVVPAMQNVL TALRKVGLSR RIKVSTTLSL GILSRSFPPS AGAFNSSYAY 180
  181 FLRPMLEFLA ENKSPFMIDL YPYYAYRDSP NNVSLDYVLF ESSSEVIDPN TGLLYKNMFD 240
  241 AQVDALYYAL TALNFRTIKI MVTETGWPTK GSPKEKAAAS SDNAETYNSN IIRHVVTNQG 300
  301 TPAKPGEAMN VYIFSLFNEN RKAGLDSERN WGLFYPDQTS VYQLDFTGKS NGFHSNSSGT 360
  361 NSSGSSNSWC IASSKASERD LKGALDWACG PGNVDCTAIQ PSQPCFQPDT LVSHASFVFN 420
  421 SYFQQNRATD VACSFGGAGV KVNKDPSYDK CIYITAGGNK TKATNATALT SSASTPRGNE 480
  481 LLQWILKLCL MISLFFSLQT MNSQAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle