YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25361103, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.92
Transmembrane Helix	15	38	0.88
Cytoplasmic	39	48	0.92
Transmembrane Helix	49	71	0.88
Non-Cytoplasmic	72	90	0.89
Transmembrane Helix	91	111	0.89
Cytoplasmic	112	116	0.70
Transmembrane Helix	117	141	0.80
Non-Cytoplasmic	142	150	0.83
Transmembrane Helix	151	171	0.94
Cytoplasmic	172	238	0.96
Transmembrane Helix	239	260	0.91
Non-Cytoplasmic	261	282	0.88
Transmembrane Helix	283	303	0.96
Cytoplasmic	304	323	0.91
Transmembrane Helix	324	344	0.93
Non-Cytoplasmic	345	351	0.76
Transmembrane Helix	352	373	0.88
Cytoplasmic	374	381	0.91
Transmembrane Helix	382	404	0.92
Non-Cytoplasmic	405	412	0.93

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAQELGIYV VESKGGAILC LLLSLLCLGT WPALMALLER RGRLPQHTYL DYSITNFLAA  60
   61 IFIAFVFGGI GESTHEAPSF ITQLTQIQDN WPSVLFAMAG GVGLSIGNLA TQYSLAFVGL 120
  121 SVTEVTAASI TVVVGTTVNY FLDNGLNRAD ILFSGVGCFM VAVCLGSAVH SSNSADIKAK 180
  181 LGKLSGDCET VTPEECQRLF GVEEEEEEEK EMENVKEGSA AFLIALENKR AIKVLGKSMV 240
  241 VGLGITFFAG LSFSLFSPLF NLATNDQWHT LKQGVPKLIV YTAFFYFSLS CFVIAVALNI 300
  301 SFLYKPVLDS PRSSFREYLS DWNGRGWALA AGLLCGFGNG LQFMGGQAAG YAASDAVQAL 360
  361 PLVSTFWGIY LFGEYRRSST RTYALLVGML VMFTVAVGLL MASAGERETR FT